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Recombinant F. meningosepticum PNGase F Protein, CF

R&D Systems, part of Bio-Techne | Catalog # 9109-GH

Effective removal of N-linked oligosaccharides from glycoproteins. Glycerol-free, suitable for downstream MS and HPLC.
R&D Systems, part of Bio-Techne
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9109-GH-01M
9109-GH-020
9109-GH-100

Key Product Details

Source

E. coli

Accession #

Conjugate

Unconjugated

Applications

Enzyme Activity

Product Specifications

Source

E. coli-derived f. meningosepticum PNGase F protein
Ala41-Asn354 with N-terminal Met and 6-His tag

Purity

>95%, by SDS-PAGE visualized with Silver Staining and quantitative densitometry by Coomassie® Blue Staining.

Endotoxin Level

<1.0 EU per 1 μg of the protein by the LAL method.

N-terminal Sequence Analysis

Met

Predicted Molecular Mass

36 kDa

SDS-PAGE

34 kDa, under reducing conditions.

Activity

Measured by its ability to deglycosylate ribonuclease B under denatured conditions.
>50% ribonuclease B (10 μg) is deglycosylated by 2.5 ng rFmPNGase F within 30 minutes, as measured under the described conditions.

Scientific Data Images for Recombinant F. meningosepticum PNGase F Protein, CF

Recombinant F. meningosepticum PNGase F Protein Enzyme Activity Diagram.

Recombinant F. meningosepticum PNGase F Protein, CF (Catalog # 9109-GH) is an amidase that cleaves the amide bond between the GlcNAc residue of an N-glycan and the underlying asparagine residue. Only the pentasaccharide core of an N-glycan is pictured here for clarity. The pentasaccharide can be extended at R1, R2 and R3 positions. R1 can be an alpha-6 fucose but not an alpha-3 fucose. R2 and R3 can be any of common monosaccharides or oligosaccharides.
Recombinant F. meningosepticum PNGase F Protein Bioactivity

Recombinant F. meningosepticum PNGase F Protein Bioactivity

Total activity per vial of Recombinant F. meningosepticum PNGase F (Catalog # 9109-GH) compared to the leading competitor. R&D Systems®PNGase F gives you 2x more enzyme at a comparable price.
Recombinant F. meningosepticum PNGase F Protein Enzyme Activity

Recombinant F. meningosepticum PNGase F Protein Enzyme Activity.

RecombinantF. meningosepticumPNGase F (Catalog # 9109-GH) from R&D Systems and a leading competitor are able to deglycosylate 10 μg of RNase B at 37 °C in one hour. TheE. coli-produced enzyme from R&D Systems offers a better value than the competition.

Formulation, Preparation and Storage

9109-GH
Formulation Supplied as a 0.2 μm filtered solution in Tris and NaCl.
Shipping The product is shipped with polar packs. Upon receipt, store it immediately at the temperature recommended below.
Stability & Storage Use a manual defrost freezer and avoid repeated freeze-thaw cycles.
  • 6 months from date of receipt, -20 to -70 °C as supplied.
  • 3 months, -20 to -70 °C under sterile conditions after opening.

Background: PNGase F

PNGase F, peptide N-glycosidase F from Flavobacterium meningosepticum, catalyzes the hydrolysis of asparagine-linked high mannose, as well as hybrid and complex oligosaccharides from glycoproteins (1). Unlike glycosidases that hydrolyze glycosidic bonds, PNGase F is an amidase that cleaves the
beta-aspartylglucosamine bond between the innermost GlcNAc of N-glycans and asparagine residues of glycoproteins (2). The enzyme is highly active on various
N-glycans except those with the innermost GlcNAc modified with alpha 1-3-linked core fucose, which is commonly found on plant glycoproteins (3). Cleavage with PNGase F will convert the asparagine residue to an aspartic residue, allowing identification of the glycosylation site by mass spectrometry (4). This purified enzyme is compatible with glycan analysis using mass spectrometry.

References

  1. Elder, J.H. and Alexander, S. (1982) Proc. Natl. Acad. Sci. USA 79:4540.
  2. Maley, F. et al. (1989) Anal. Biochem. 180:195.
  3. Tarentino, A.L. and Plummer, T.H. (1994) Methods Enzymol 230:44.
  4. Zhang, H. et al. (2003) Nat. Biotechnol. 21:660.

Long Name

Peptide-N4-(N-acetyl-beta-D-glucosaminyl)asparagine Amidase F

Alternate Names

PNGF

UniProt

Additional PNGase F Products

Product Documents for Recombinant F. meningosepticum PNGase F Protein, CF

Certificate of Analysis

To download a Certificate of Analysis, please enter a lot number in the search box below.

Note: Certificate of Analysis not available for kit components.

Product Specific Notices for Recombinant F. meningosepticum PNGase F Protein, CF

For research use only

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